PELGAS 2007

Name: PELGAS 2007
Start: 2007-04-25
End: 2007-05-27
Location: Bay of Biscay

Type	Oceanographic cruise
Set	This cruise is part of the set PELGAS
Ship	Thalassa
Ship owner	Ifremer
Dates	25/04/2007 - 27/05/2007
Chief scientist(s)	MASSE Jacques
	ÉCOLOGIE ET MODÈLES POUR L'HALIEUTIQUE Centre Ifremer de Nantes Rue de l'Ile d'Yeu BP 2105 44311 Nantes Cedex 3 +33 (0)2 40 37 41 67
DOI	10.17600/7040040
Objective	Assessing anchovy and sardine biomasses in the Bay of Biscay using acoustics and associated pelagic trawl hauls. Characterization of the habitats' hydro-biological environment. Initial data was acquired using the PELGAS configuration with the multibeam fisheries echosounder (SMFH). The cruise was conducted in the framework of Theme 4 ' Fisheries resources, sustainable fishing and enhanced use and the programs on 1) Information systems, observation techniques, economics and diagnosis for changes in resources and their use and 2)Ecosystem-based approach for integrated management of fisheries resources.

Sea/Ocean

Bay of Biscay

( )

Ports

Port of departure : Santander (Spain)

Port of return : Brest (France)

Scientific Authority

ÉCOLOGIE ET MODÈLES POUR L'HALIEUTIQUE

Centre Ifremer de Nantes

Rue de l'Ile d'Yeu

44311 Nantes Cedex 3

+33 (0)2 40 37 41 67

Participating bodie(s)

IFREMER - Nantes, Sète, Lorient, Boulogne s/mer, Brest / Université - La Rochelle / CNRS - La Rochelle / EPHE - Perpignan / CRMM - La Rochelle / AZTI - St Sébastien (Espagne) / IEO - Gijon (Espagne).

Discipline(s)

PHYSICAL OCEANOGRAPHY
BIOLOGICAL OCEANOGRAPHY
ENVIRONMENT
FISHERIES
CHEMICAL OCEANOGRAPHY

Code	Label	Quantity	PI
B02	Phytoplankton pigments (eg chloroph Fluorescence	81 stations	PLANQUE Benjamin
B09	Zooplankton	47 stations	DUPUY Christine
B13	Eggs & larvae CUFES + vertical fishing	725	PETITGAS Pierre
B14	Pelagic fish Sizes (+ weights, otoliths, samples)	18221 observations	MASSE Jacques
B25	Birds	1199 observations	VAN CANNEYT Olivier
B26	Mammals & reptiles	28 observations	VAN CANNEYT Olivier
B28	Acoustic reflection on marine organ Continuous acquisition (in hours of recording)	412 hours	MASSE Jacques
B65	Exploratory fishing Pelagic trawls, or mesozooplankton	48 hauls	MASSE Jacques
B90	Other biological/fisheries meas. Samples for genetic analysis	1150 specimens	LENFANT Philippe
G73	Single-beam echosounding 5 frequencies (18, 38, 70, 120, 200 kHz) in h	412 hours	MASSE Jacques
H09	Water bottle stations Chlorophyll, microzooplankton	35 stations	DUPUY Christine
H10	CTD stations T, S, Fluo profiles	81 stations	PLANQUE Benjamin
H11	Subsurface meas. underway (T,S) T, S, Fluo (in nm)	2500	PLANQUE Benjamin
H71	Surface measurements underway (T,S) Thermosalinometer	-	MASSE Jacques
M06	Routine standard measurements Wind and weather station	-	MASSE Jacques

Summary of measurements

-Acoustic exploration (acquisition and storage of signals on 5 frequencies) for the distribution and abundance of pelagic fish species, mainly anchovies and sardines.
-Pelagic (or bottom, or mesopelagic) trawl fisheries to identify target species and characterize resources (size distributions, demographics, biological characteristics).
-Egg counts using surface pumping with the CUFES system to determining spawning zones.
-Taking samples on adult sardines and anchovies for genetic analyses to distinguish whether different "groups" exist in the Bay of Biscay.
-Catching plankton to characterize the biotic environment of small pelagic fish populations (biochemical indices descriptors of zooplankton dynamics).
-CBT stations and continuation observation to describe hydrological conditions by associating available satellite photos and circulation modelling results following the model developed by P. Lazure.
-Characterizing the diversity and abundance of microzooplankton as well as other plankton compartments in order to evaluate the structure of the plankton food web.
-Identification and visual counts of cetaceans and birds present in the area to describe higher predators in the pelagic ecosystem of the Bay of Biscay.
-Density column used to study vertical migration of eggs in the water column.

Location map

Positionning system

Geodetic system : WORLD GEODETIC SYSTEM 1984 = WGS84

Positioning system : GPS différentiel

Joint document(s)

Information concerning the methods of analysis of the cruises PELGAS

Published data

Petitgas Pierre, Doray Mathieu, Boyra Guillermo, Duhamel Erwan, Sobradillo Bea, Martinez Urdane (2023). Maps of sardine and anchovy length distributions in the Bay of Biscay in spring and autumn. https://doi.org/10.17882/92818

Grandrémy Nina, Bourriau Paul, Daché Edwin, Danielou Marie-Madeleine, Doray Mathieu, Dupuy Christine, Huret Martin, Jalabert Laetitia, Le Mestre Sophie, Nowaczyk Antoine, Petitgas Pierre, Pineau Philippe, Raphalen Elio, Romagnan Jean-Baptiste (2023). PELGAS Bay of Biscay ZooScan zooplankton Dataset (2004-2016). https://doi.org/10.17882/94052

Boens Andy, Grellier Patrick, Duhamel Erwan, Doray Mathieu, Lebigre Christophe, Bled--Defruit Geoffrey, Petitgas Pierre (2023). Otolith growth and individual parameters of anchovy and sardine in the Bay of Biscay. https://doi.org/10.17882/96270

Data managed by SISMER

COMPUTERISED SCIENTIFIC LOGBOOK (1 File)
File	Mission	Processing level	Size	Format
Restricted access pelgas07		RAW DATA	54 MB	Base MySQL CASINO+

DISSOLVED CHEMICALS IN THE WATER COLUMN (1 File)
File	Mission	Processing level	Size	Format
Open access 2007_7040040.bot		DATA CONTROLLED WITH SCOOP	55 KB	MEDATLAS, ODV or NC

FRENCH COASTAL OR LOW RESOLUTION CTD (1 File)
File	Mission	Processing level	Size	Format
Open access 2007_7040040.ctd		DATA CONTROLLED WITH SCOOP	439 KB	MEDATLAS, ODV or NC

METEOROLOGICAL OBSERVATIONS - FRENCH OCEANOGRAPHIC CRUISES (1 File)
File	Mission	Processing level	Size	Format
Open access pel07.met		RAW DATA	42 MB	METEO .met

NATIONAL BANK OF RAW BATHYMETRY : SINGLE-BEAM ECHOSOUNDING (1 File)
File	Mission	Processing level	Size	Format
Restricted access pel07.son		RAW DATA	48 MB	BATHY.VERTICALE .SON

NAVIGATION - FRENCH OCEANOGRAPHIC CRUISES (1 File)
File	Mission	Processing level	Size	Format
Open access PELGAS07.nvi		CONTROLLED DATA	7 MB	NetCDF or Shapefile

UNDERWAY SEA SURFACE SALINITY FROM THERMOSALINOMETER (1 File)
File	Mission	Processing level	Size	Format
Open access pel07.sal		RAW DATA	36 MB	THERMOSALINOMETRE

WIND STATION (ATALANTE) (1 File)
File	Mission	Processing level	Size	Format
Open access pel07.ven		RAW DATA	28 MB	CENTRALE VENT .ven

Check all

Bibliography

Publications

Menu Clara, Pecquerie Laure, Bacher Cedric , Doray Mathieu , Hattab Tarek, Van Der Kooij Jeroen, Huret Martin (2023). Testing the bottom-up hypothesis for the decline in size of anchovy and sardine across European waters through a bioenergetic modeling approach. Progress In Oceanography, 210, 102943 (20p.). Publisher's official version : https://doi.org/10.1016/j.pocean.2022.102943 , Open Access version : https://archimer.ifremer.fr/doc/00812/92434/

Grandremy Nina, Romagnan Jean-Baptiste, Dupuy Christine, Doray Mathieu , Huret Martin , Petitgas Pierre (2023). Hydrology and small pelagic fish drive the spatio–temporal dynamics of springtime zooplankton assemblages over the Bay of Biscay continental shelf. Progress In Oceanography, 210, 102949 (18p.). Publisher's official version : https://doi.org/10.1016/j.pocean.2022.102949 , Open Access version : https://archimer.ifremer.fr/doc/00813/92490/

Ruffine Livio, Donval Jean-Pierre, Croguennec Claire, Bignon Laurent, Birot Dominique, Battani Anne, Bayon Germain, Caprais Jean-Claude, Lanteri Nadine, Levache Denis, Dupre Stephanie (2017). Gas Seepage along the Edge of the Aquitaine Shelf (France): Origin and Local Fluxes. Geofluids, 2017(4240818), 1-13. Publisher's official version : https://doi.org/10.1155/2017/4240818 , Open Access version : https://archimer.ifremer.fr/doc/00394/50579/

Masse Jacques, Sanchez Florence , Delaunay Damien, Robert J. M., Petitgas Pierre (2016). A partnership between science and industry for a monitoring of anchovy & sardine in the Bay of Biscay: When fishermen are actors of science. Fisheries Research, 178, 26-38. Publisher's official version : https://doi.org/10.1016/j.fishres.2015.11.018 , Open Access version : https://archimer.ifremer.fr/doc/00301/41214/

Petitgas Pierre , Woillez Mathieu , Doray Mathieu , Rivoirard Jacques (2016). A Geostatistical Definition of Hotspots for Fish Spatial Distributions. Mathematical Geosciences, 48(1), 65-77. Publisher's official version : https://doi.org/10.1007/s11004-015-9592-z , Open Access version : https://archimer.ifremer.fr/doc/00273/38380/

Chaalali Aurelie, Saint-Beat Blanche, Lassalle Geraldine, Le Loc'h Francois, Tecchio Samuele, Safi Georges, Savenkoff Claude, Lobry Jeremy, Niquil Nathalie (2015). A new modeling approach to define marine ecosystems food-web status with uncertainty assessment. Progress In Oceanography, 135, 37-47. Publisher's official version : https://doi.org/10.1016/j.pocean.2015.03.012 , Open Access version : https://archimer.ifremer.fr/doc/00273/38427/

Petitgas Pierre , Doray Mathieu , Huret Martin , Masse Jacques, Woillez Mathieu (2014). Modelling the variability in fish spatial distributions over time with empirical orthogonal functions: anchovy in the Bay of Biscay. Ices Journal Of Marine Science, 71(9), 2379-2389. Publisher's official version : https://doi.org/10.1093/icesjms/fsu111 , Open Access version : https://archimer.ifremer.fr/doc/00222/33365/

Dupre Stephanie , Berger Laurent , Le Bouffant Naig, Scalabrin Carla , Bourillet Jean-Francois (2014). Fluid emissions at the Aquitaine Shelf (Bay of Biscay, France): A biogenic origin or the expression of hydrocarbon leakage? Continental Shelf Research, 88, 24-33. Publisher's official version : https://doi.org/10.1016/j.csr.2014.07.004 , Open Access version : https://archimer.ifremer.fr/doc/00201/31192/

Vandromme Pieter, Nogueira Enrique, Huret Martin , Lopez-Urrutia Angel, Gonzalez-Nuevo Gonzalez G., Sourisseau Marc , Petitgas Pierre (2014). Springtime zooplankton size structure over the continental shelf of the Bay of Biscay. Ocean Science, 10(5), 821-835. Publisher's official version : https://doi.org/10.5194/os-10-821-2014 , Open Access version : https://archimer.ifremer.fr/doc/00221/33246/

Huret Martin , Sourisseau Marc , Petitgas Pierre , Struski Caroline, Leger Fabien, Lazure Pascal (2013). A multi-decadal hindcast of a physical–biogeochemical model and derived oceanographic indices in the Bay of Biscay. Journal Of Marine Systems, 109, S77-S94. Publisher's official version : https://doi.org/10.1016/j.jmarsys.2012.02.009 , Open Access version : https://archimer.ifremer.fr/doc/00114/22538/

Trenkel Verena , Berger Laurent (2013). A fisheries acoustic multi-frequency indicator to inform on large scale spatial patterns of aquatic pelagic ecosystems. Ecological Indicators, 30, 72-79. Publisher's official version : https://doi.org/10.1016/j.ecolind.2013.02.006 , Open Access version : https://archimer.ifremer.fr/doc/00128/23886/

Batifoulier Francois, Lazure Pascal , Velo-Suarez Lourdes, Maurer Daniele, Bonneton Philippe, Charria Guillaume , Dupuy C, Gentien Patrick (2013). Distribution of Dinophysis species in the Bay of Biscay and possible transport pathways to Arcachon Bay. Journal Of Marine Systems, 109, S273-S283. https://doi.org/10.1016/j.jmarsys.2011.12.007

Petitgas Pierre , Alheit Juergen, Peck Myron A., Raab Kristina, Irigoien Xabier, Huret Martin , Van Der Kooij Jeroen, Pohlmann Thomas, Wagner Carola, Zarraonaindia Iratxe, Dickey-Collas Mark (2012). Anchovy population expansion in the North Sea. Marine Ecology-progress Series, 444, 1-13. Publisher's official version : https://doi.org/10.3354/meps09451 , Open Access version : https://archimer.ifremer.fr/doc/00060/17140/

Petitgas Pierre , Doray Mathieu , Masse Jacques, Grellier Patrick (2011). Spatially explicit estimation of fish length histograms, with application to anchovy habitats in the Bay of Biscay. Ices Journal Of Marine Science, 68(10), 2086-2095. Publisher's official version : https://doi.org/10.1093/icesjms/fsr139 , Open Access version : https://archimer.ifremer.fr/doc/00049/16042/

Certain Gregoire, Masse Jacques, Van Canneyt O., Petitgas Pierre , Doremus G., Santos M. B., Ridoux Vincent (2011). Investigating the coupling between small pelagic fish and marine top predators using data collected from ecosystem-based surveys. Marine Ecology-progress Series, 422, 23-39. Publisher's official version : https://doi.org/10.3354/meps08932 , Open Access version : https://archimer.ifremer.fr/doc/00031/14257/

Woillez Mathieu , Petitgas Pierre , Huret Martin , Struski Caroline, Leger Fabien (2010). Statistical monitoring of spatial patterns of environmental indices for integrated ecosystem assessment: Application to the Bay of Biscay pelagic zone. Progress In Oceanography, 87(1-4), 83-93. https://doi.org/10.1016/j.pocean.2010.09.009

Huret Martin , Petitgas Pierre , Woillez Mathieu (2010). Dispersal kernels and their drivers captured with a hydrodynamic model and spatial indices: A case study on anchovy (Engraulis encrasicolus) early life stages in the Bay of Biscay. Progress In Oceanography, 87(1-4), 6-17. Publisher's official version : https://doi.org/10.1016/j.pocean.2010.09.023 , Open Access version : https://archimer.ifremer.fr/doc/00024/13544/

Dubreuil Julien, Petitgas Pierre (2009). Energy density of anchovy Engraulis encrasicolus in the Bay of Biscay. Journal of Fish Biology, 74(3), 521-534. Publisher's official version : https://doi.org/10.1111/j.1095-8649.2008.02143.x , Open Access version : https://archimer.ifremer.fr/doc/00000/6143/

References of Technical Reports

Maillard De La Morandais Jeanne (2024). Compréhension de la variabilité temporelle de la croissance chez la sardine du golfe de Gascogne (Sardina pilchardus). Rapport de stage. Licence professionnelle : Métiers de la Protection de la Gestion de l’Environnement – Environnement Marin, Ressources et Gestion. Université du Littoral Cote d'Opale.

Peyrafort Manon (2015). Variations spatio-temporelles de la croissance de la sardine dans le golfe de Gascogne à partir de la série de données PELGAS (2000-2015).

Doray Mathieu , Badts Vincent , Huret Martin , Duhamel Erwan , Doremus Ghislain, Masse Jacques, Petitgas Pierre (2015). Guide du chef de mission de la campagne PELGAS. https://doi.org/10.13155/36054

Doray Mathieu , Badts Vincent , Masse Jacques, Duhamel Erwan , Huret Martin , Doremus Ghislain, Petitgas Pierre (2014). Manual of fisheries survey protocols. PELGAS surveys (PELagiques GAScogne). RBE/EMH 2014-01. https://doi.org/10.13155/30259

Despois Emilie (2014). Analyse et comparaison de la distribution démographique de l’anchois et de la sardine du golfe de Gascogne basées sur des campagnes océanographiques automnales et printanières.

ICES (2013). Report of the Working Group on Fisheries Acoustics Science and Technology (WGFAST), 16-19 April 2013 San Sebastian, Spain. ICES CM 2013/SSGESST:09.

Petitgas Pierre , Duhamel Erwan , Doray Mathieu (2013). Coherence between Egg (BIOMAN) and Acoustic (PELGAS) survey estimates (Bay of Biscay anchovy). Working Document. ICES/ CIEM. WGHANSA, 21-28 June 2013.

Rocklin Delphine, Pelletier Dominique , Levrel Harold (2011). Projet Système d'Information sur la Nature et les Paysages, Volet mer (SINP-mer). Test des indicateurs institutionnels de biodiversité marine et côtière et correspondance avec les critères et normes méthodologiques concernant le bon état écologique des eaux marines de la DCSMM. Projet SINP mer NA : A110204.

Thesis using campaign data

Grandremy Nina (2023). Dynamiques spatio-temporelles du zooplancton, en lien avec l’habitat et les petits poissons pélagiques, dans le Golfe de Gascogne. PhD Thesis, Université de Nantes.

Torelli Martina (2021). Modélisation des processus du méthane microbien en milieu marin : de la source aux émissions. Aperçus de l’analyse des bassins / Modelling Microbial Methane Processes in Marine Environments: from Source to Seep. Insights from Basin Analysis. PhD Thesis, Université Sorbonne.